- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.56 Å
- Oligo State
- homo-24-mer
- Ligands
- 22 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)EDO.6: 7 residues within 4Å:- Chain D: A.44, L.45, H.46, Y.165, D.168, K.169
- Chain W: N.151
4 PLIP interactions:2 interactions with chain W, 2 interactions with chain D- Hydrogen bonds: W:N.151, W:N.151, D:H.46, D:K.169
EDO.14: 4 residues within 4Å:- Chain J: A.16, R.19, A.110, L.114
1 PLIP interactions:1 interactions with chain J- Hydrogen bonds: J:R.19
EDO.15: 3 residues within 4Å:- Chain L: R.19, M.20, A.110
2 PLIP interactions:2 interactions with chain L- Hydrogen bonds: L:R.19, L:A.110
EDO.16: 3 residues within 4Å:- Chain M: R.19, M.20, A.110
2 PLIP interactions:2 interactions with chain M- Hydrogen bonds: M:R.19, M:A.110
EDO.17: 4 residues within 4Å:- Chain N: A.16, R.19, M.20, A.110
No protein-ligand interaction detected (PLIP)EDO.18: 4 residues within 4Å:- Chain N: D.12, A.15, A.16, R.19
2 PLIP interactions:2 interactions with chain N- Hydrogen bonds: N:D.12, N:D.12
EDO.19: 6 residues within 4Å:- Chain C: K.68, K.72
- Chain O: D.39, H.46
- Chain R: K.143, D.147
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain O- Hydrogen bonds: C:K.68, O:H.46
EDO.21: 3 residues within 4Å:- Chain P: R.87, D.88, E.89
5 PLIP interactions:5 interactions with chain P- Hydrogen bonds: P:R.87, P:D.88, P:D.88, P:E.89, P:E.89
EDO.28: 3 residues within 4Å:- Chain T: A.16, R.19, D.113
1 PLIP interactions:1 interactions with chain T- Hydrogen bonds: T:R.19
EDO.30: 8 residues within 4Å:- Chain N: N.151
- Chain U: A.44, L.45, H.46, N.47, Y.165, D.168, K.169
4 PLIP interactions:1 interactions with chain N, 3 interactions with chain U- Hydrogen bonds: N:N.151, U:H.46, U:N.47, U:K.169
EDO.31: 9 residues within 4Å:- Chain K: N.108, L.112, V.139
- Chain U: Q.7, N.8, R.73, D.123, P.124, H.125
7 PLIP interactions:6 interactions with chain U, 1 interactions with chain K- Hydrogen bonds: U:N.8, U:R.73, U:D.123, U:H.125, K:N.108
- Water bridges: U:Q.7, U:Q.7
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bertini, I. et al., Structural insights into the ferroxidase site of ferritins from higher eukaryotes. J.Am.Chem.Soc. (2012)
- Release Date
- 2013-01-16
- Peptides
- Ferritin, middle subunit: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
UV
VW
XX
W
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.56 Å
- Oligo State
- homo-24-mer
- Ligands
- 22 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bertini, I. et al., Structural insights into the ferroxidase site of ferritins from higher eukaryotes. J.Am.Chem.Soc. (2012)
- Release Date
- 2013-01-16
- Peptides
- Ferritin, middle subunit: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
UV
VW
XX
W