SMTL ID : 4dch.1

Insights into Glucokinase Activation Mechanism: Observation of Multiple Distinct Protein Conformations

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.1: 9 residues within 4Å: Chain A: N.204, D.205, T.206, I.225, G.229, C.230, N.231, E.256, E.290 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.204, A:N.204, A:C.230, A:N.231, A:E.256 Water bridges: A:G.229, A:E.256, A:E.256, A:E.256

1 x 4DC: (2R)-3-cyclopentyl-2-[4-(methylsulfonyl)phenyl]-N-(1,3-thiazol-2-yl)propanamide(Non-covalent)

4DC.2: 14 residues within 4Å: Chain A: Y.61, V.62, R.63, S.64, T.65, P.66, E.67, Q.98, W.99, M.210, Y.214, V.455, K.458, K.459 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:P.66, A:Y.214, A:Y.214, A:Y.214, A:V.455 Hydrogen bonds: A:R.63, A:R.63, A:E.67 pi-Stacking: A:W.99

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 4 residues within 4Å: Chain A: T.60, V.203, N.204, K.459 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain A: R.358 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, S. et al., Insights into Mechanism of Glucokinase Activation: OBSERVATION OF MULTIPLE DISTINCT PROTEIN CONFORMATIONS. J.Biol.Chem. (2012)

Release Date

2012-02-08

Peptides

Glucokinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glucokinase