SMTL ID : 4des.1

Crystal Structure of the Wild Type TTR Binding Chrysin (TTRwt:CHR)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-tetramer

Ligands

4 x 57D: chrysin(Non-covalent)

57D.1: 14 residues within 4Å: Chain A: K.6, T.97, A.99, L.101, S.108, T.110, V.112 Chain C: K.6, L.8, A.99, L.101, S.108, T.110 Ligands: 57D.3 7 PLIP interactions: 4 interactions with chain C, 3 interactions with chain A Hydrophobic interactions: C:A.99, C:L.101, C:L.101, A:K.6, A:L.101 Hydrogen bonds: C:K.6, A:K.6 57D.2: 15 residues within 4Å: Chain B: K.6, L.8, T.97, A.99, L.101, S.108, T.110, V.112 Chain D: K.6, L.8, A.99, L.101, S.108, T.110 Ligands: 57D.4 7 PLIP interactions: 3 interactions with chain D, 4 interactions with chain B Hydrophobic interactions: D:K.6, D:A.99, D:L.101, B:K.6, B:L.8, B:L.101 Water bridges: B:K.6 57D.3: 14 residues within 4Å: Chain A: K.6, L.8, A.99, L.101, S.108, T.110 Chain C: K.6, T.97, A.99, L.101, S.108, T.110, V.112 Ligands: 57D.1 7 PLIP interactions: 4 interactions with chain A, 3 interactions with chain C Hydrophobic interactions: A:A.99, A:L.101, A:L.101, C:K.6, C:L.101 Hydrogen bonds: A:K.6, C:K.6 57D.4: 15 residues within 4Å: Chain B: K.6, L.8, A.99, L.101, S.108, T.110 Chain D: K.6, L.8, T.97, A.99, L.101, S.108, T.110, V.112 Ligands: 57D.2 7 PLIP interactions: 4 interactions with chain D, 3 interactions with chain B Hydrophobic interactions: D:K.6, D:L.8, D:L.101, B:K.6, B:A.99, B:L.101 Water bridges: D:K.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Trivella, D.B. et al., Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis. J.Struct.Biol. (2012)

Release Date

2012-11-21

Peptides

Transthyretin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Transthyretin

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