SMTL ID : 4dlo.2 (1 other biounit)

Crystal structure of the GAIN and HormR domains of brain angiogenesis inhibitor 3 (BAI3)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x NAG- FUL- NAG: beta-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-FUL-NAG.1: 5 residues within 4Å: Chain A: P.44, N.46, N.116, Y.118, K.166 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.166, A:K.166

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 7 residues within 4Å: Chain A: Q.82, I.85, K.86, E.127, R.130, N.131, E.179 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.85, A:K.86 Hydrogen bonds: A:Q.82, A:E.127, A:E.179

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 1 residues within 4Å: Chain A: E.22 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.22 GOL.4: 5 residues within 4Å: Chain A: P.68, F.70, K.166, D.169 Ligands: GOL.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:P.68, A:D.169, A:D.169 Water bridges: A:K.166 GOL.5: 6 residues within 4Å: Chain A: P.16, Y.17, I.19, P.21, V.62, A.63 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.16, A:Y.17 Water bridges: A:W.65 GOL.6: 7 residues within 4Å: Chain A: E.66, Q.67, P.68, S.69, D.169, Q.172 Ligands: GOL.4 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.66, A:E.66, A:Q.67, A:P.68, A:S.69, A:Q.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arac, D. et al., A novel evolutionarily conserved domain of cell-adhesion GPCRs mediates autoproteolysis. Embo J. (2012)

Release Date

2012-02-22

Peptides

Brain-specific angiogenesis inhibitor 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Brain-specific angiogenesis inhibitor 3

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