SMTL ID : 4dqk.1 (1 other biounit)

Crystal structure of the FAD binding domain of cytochrome P450 BM3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 21 residues within 4Å: Chain A: H.42, Q.99, R.140, R.170, Y.171, Y.172, S.173, T.188, V.189, S.190, V.192, E.195, A.196, W.197, Y.203, G.205, I.206, A.207, S.208, T.248, W.389 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:W.389, A:W.389 Hydrogen bonds: A:Q.99, A:Y.171, A:Y.171, A:S.173, A:T.188, A:S.190, A:E.195, A:W.197, A:I.206, A:A.207, A:S.208 Water bridges: A:R.140, A:R.168, A:T.188, A:S.198, A:Y.203 Salt bridges: A:R.170, A:R.170 pi-Stacking: A:Y.172, A:W.197, A:W.197, A:W.197, A:Y.203, A:W.389, A:W.389

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: K.13, H.26, R.254, Y.288, E.291 4 PLIP interactions: 4 interactions with chain A Water bridges: A:K.13 Salt bridges: A:K.13, A:H.26, A:R.254 SO4.3: 4 residues within 4Å: Chain A: R.280, S.308, R.309, Y.317 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.308, A:Y.317 Water bridges: A:C.279, A:R.280, A:S.308, A:R.309 Salt bridges: A:R.309 SO4.4: 1 residues within 4Å: Chain A: R.22 5 PLIP interactions: 5 interactions with chain A Water bridges: A:T.248, A:T.248, A:T.248, A:D.285 Salt bridges: A:R.22

2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.5: 7 residues within 4Å: Chain A: L.333, D.334, W.374, Q.377, L.378, K.381, R.383 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.377, A:K.381, A:R.383 Water bridges: A:R.383 PG4.6: 5 residues within 4Å: Chain A: E.323, A.354, T.355, K.358, S.359 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.359 Water bridges: A:T.355

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joyce, M.G. et al., The crystal structure of the FAD/NADPH-binding domain of flavocytochrome P450 BM3. Febs J. (2012)

Release Date

2012-03-07

Peptides

Bifunctional P-450/NADPH-P450 reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bifunctional P-450/NADPH-P450 reductase

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