SMTL ID : 4dsz.1

Crystal Structure of DPP-IV with Compound C2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x DC3: (2R)-4-[4-(3-methylphenyl)-1H-1,2,3-triazol-1-yl]-1-(2,4,5-trifluorophenyl)butan-2-amine(Non-covalent)

DC3.1: 14 residues within 4Å: Chain A: R.87, E.167, E.168, F.319, Y.509, S.592, Y.593, V.618, W.621, Y.624, Y.628, N.672, V.673, H.702 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.319, A:F.319, A:Y.624, A:V.673 Hydrogen bonds: A:E.168, A:Y.624 pi-Stacking: A:F.319, A:Y.628 DC3.2: 14 residues within 4Å: Chain B: R.87, E.167, E.168, F.319, Y.509, S.592, Y.593, V.618, W.621, Y.624, Y.628, N.672, V.673, H.702 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:F.319, B:F.319, B:Y.624, B:V.673 Hydrogen bonds: B:E.167, B:Y.624 pi-Stacking: B:F.319, B:Y.628 Halogen bonds: B:E.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiong, B. et al., Crystal Structure of DPP-IV with Compound C2. To be Published

Release Date

2013-02-27

Peptides

Dipeptidyl peptidase 4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dipeptidyl peptidase 4

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