SMTL ID : 4du0.5 (4 other biounits)

Crystal structure of human alpha-defensin 1, HNP1 (G17A mutant)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: A.1, C.2, C.30 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.1, A:C.30 GOL.4: 1 residues within 4Å: Chain B: C.2 No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: P.7, L.25, A.27 Ligand excluded by PLIP CL.3: 1 residues within 4Å: Chain A: A.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, L. et al., Invariant gly residue is important for alpha-defensin folding, dimerization, and function: a case study of the human neutrophil alpha-defensin HNP1. J.Biol.Chem. (2012)

Release Date

2012-04-11

Peptides

Neutrophil defensin 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Neutrophil defensin 1

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