SMTL ID : 4dva.1

The crystal structure of human urokinase-type plasminogen activator catalytic domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: H.46, Q.195, G.196, S.198 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.196, A:S.198, A:S.198 Water bridges: A:V.30, A:H.46, A:Q.195, A:Q.195 Salt bridges: A:H.46 SO4.2: 3 residues within 4Å: Chain A: Q.169, P.170, H.171 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.171 Salt bridges: A:H.171

2 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.3: 9 residues within 4Å: Chain A: G.132, K.160, L.161, I.162, E.166, A.185, D.186, P.187, W.189 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.166 P6G.4: 2 residues within 4Å: Chain A: V.27, N.67 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jiang, L. et al., Rezymogenation of active urokinase induced by an inhibitory antibody. Biochem.J. (2013)

Release Date

2013-01-16

Peptides

Urokinase-type plasminogen activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

Urokinase-type plasminogen activator

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