- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 4 x K: POTASSIUM ION(Non-covalent)
K.2: 6 residues within 4Å:- Chain A: V.328, D.330, F.333, G.367, P.371
- Ligands: ANP.1
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:V.328, A:D.330, A:F.333, A:G.367
K.6: 6 residues within 4Å:- Chain B: V.328, D.330, F.333, G.367, P.371
- Ligands: ANP.5
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:V.328, B:D.330, B:F.333, B:G.367
K.10: 6 residues within 4Å:- Chain C: V.328, D.330, F.333, G.367, P.371
- Ligands: ANP.9
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:V.328, C:D.330, C:F.333, C:G.367
K.14: 6 residues within 4Å:- Chain D: V.328, D.330, F.333, G.367, P.371
- Ligands: ANP.13
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:V.328, D:D.330, D:F.333, D:G.367
- 4 x WJ1: (S)-2-chloro-3-phenylpropanoic acid(Non-covalent)
WJ1.3: 10 residues within 4Å:- Chain A: L.98, I.102, Y.129, L.158, L.159, H.162, R.197, I.200, R.201, A.204
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:L.98, A:I.102, A:L.158, A:L.158, A:L.159, A:H.162, A:I.200, A:A.204
- Salt bridges: A:H.162, A:R.197, A:R.201
WJ1.7: 10 residues within 4Å:- Chain B: L.98, I.102, Y.129, L.158, L.159, H.162, R.197, I.200, R.201, A.204
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:L.98, B:I.102, B:L.158, B:L.158, B:L.159, B:H.162, B:I.200, B:A.204
- Salt bridges: B:H.162, B:R.197, B:R.201
WJ1.11: 10 residues within 4Å:- Chain C: L.98, I.102, Y.129, L.158, L.159, H.162, R.197, I.200, R.201, A.204
12 PLIP interactions:12 interactions with chain C- Hydrophobic interactions: C:L.98, C:I.102, C:L.158, C:L.158, C:L.159, C:H.162, C:I.200, C:A.204
- Hydrogen bonds: C:Y.129
- Salt bridges: C:H.162, C:R.197, C:R.201
WJ1.15: 10 residues within 4Å:- Chain D: L.98, I.102, Y.129, L.158, L.159, H.162, R.197, I.200, R.201, A.204
12 PLIP interactions:12 interactions with chain D- Hydrophobic interactions: D:L.98, D:I.102, D:L.158, D:L.158, D:L.159, D:H.162, D:I.200, D:A.204
- Hydrogen bonds: D:Y.129
- Salt bridges: D:H.162, D:R.197, D:R.201
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.4: 2 residues within 4Å:- Chain A: N.279
- Ligands: ANP.1
No protein-ligand interaction detected (PLIP)MG.8: 2 residues within 4Å:- Chain B: N.279
- Ligands: ANP.5
No protein-ligand interaction detected (PLIP)MG.12: 2 residues within 4Å:- Chain C: N.279
- Ligands: ANP.9
No protein-ligand interaction detected (PLIP)MG.16: 2 residues within 4Å:- Chain D: N.279
- Ligands: ANP.13
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tso, S.C. et al., Structures of branched-chain alpha-ketoacid dehydrogenase kinase-inhibitor complexes. To be Published
- Release Date
- 2013-03-13
- Peptides
- [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 4 x K: POTASSIUM ION(Non-covalent)
- 4 x WJ1: (S)-2-chloro-3-phenylpropanoic acid(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tso, S.C. et al., Structures of branched-chain alpha-ketoacid dehydrogenase kinase-inhibitor complexes. To be Published
- Release Date
- 2013-03-13
- Peptides
- [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A