SMTL ID : 4e1m.1

Crystal Structure of HIV-1 Integrase with a non-catayltic site inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x TQ2: (2S)-tert-butoxy[4-(3,4-dimethylphenyl)-2-methylquinolin-3-yl]ethanoic acid(Non-covalent)

TQ2.1: 13 residues within 4Å: Chain A: Q.122, A.123, E.124, H.125, T.128, M.132 Chain B: Q.49, L.56, A.78, T.79, A.82, A.83, W.86 8 PLIP interactions: 4 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:E.124, A:H.125, A:T.128 Salt bridges: A:H.125 Hydrophobic interactions: B:L.56, B:A.82, B:A.82, B:W.86 TQ2.2: 13 residues within 4Å: Chain A: Q.49, L.56, A.78, T.79, A.82, A.83, W.86 Chain B: Q.122, A.123, E.124, H.125, T.128, M.132 7 PLIP interactions: 4 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:L.56, A:A.82, A:A.82, A:W.86 Hydrogen bonds: B:E.124, B:H.125 Salt bridges: B:H.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsiang, M. et al., New Class of HIV-1 Integrase (IN) Inhibitors with a Dual Mode of Action. J.Biol.Chem. (2012)

Release Date

2012-04-25

Peptides

HIV-1 Integrase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HIV-1 Integrase

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