SMTL ID : 4e2i.2 (1 other biounit)

The Complex Structure of the SV40 Helicase Large T Antigen and p68 Subunit of DNA Polymerase Alpha-Primase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 5.00 Å

Oligo State

hetero-6-5-mer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: F.34, C.37, C.40, H.48, H.52 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.48, A:H.52 ZN.2: 5 residues within 4Å: Chain B: F.34, C.37, C.40, H.48, H.52 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.48, B:H.52 ZN.3: 5 residues within 4Å: Chain C: F.34, C.37, C.40, H.48, H.52 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:H.48, C:H.52 ZN.4: 4 residues within 4Å: Chain D: C.37, C.40, H.48, H.52 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:H.48, D:H.52 ZN.5: 5 residues within 4Å: Chain E: F.34, C.37, C.40, H.48, H.52 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:H.48, E:H.52 ZN.6: 4 residues within 4Å: Chain F: C.37, C.40, H.48, H.52 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:H.48, F:H.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, B. et al., Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase alpha-primase. J.Biol.Chem. (2012)

Release Date

2012-06-13

Peptides

Large T antigen: ABCDEF
DNA polymerase alpha subunit B: GHIJK

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

C
I

D
J

E
K

F
L

G
U

H
W

I
7

J
9

K
8

Large T antigen

DNA polymerase alpha subunit B

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