SMTL ID : 4e2q.1 (1 other biounit)

Crystal Structure of (S)-Ureidoglycine Aminohydrolase from Arabidopsis thaliana

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-octamer

Ligands

8 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: E.203, H.205, H.209, Q.243 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.203, A:H.205, A:H.209, H2O.1 MN.2: 4 residues within 4Å: Chain B: E.203, H.205, H.209, Q.243 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.203, B:H.205, B:H.209 MN.3: 4 residues within 4Å: Chain C: E.203, H.205, H.209, Q.243 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.203, C:H.205, C:H.209, H2O.8 MN.4: 4 residues within 4Å: Chain D: E.203, H.205, H.209, Q.243 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:E.203, D:E.203, D:H.205, D:H.209 MN.5: 4 residues within 4Å: Chain E: E.203, H.205, H.209, Q.243 4 PLIP interactions: 3 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:E.203, E:H.205, E:H.209, H2O.12 MN.6: 4 residues within 4Å: Chain F: E.203, H.205, H.209, Q.243 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:E.203, F:H.205, F:H.209 MN.7: 4 residues within 4Å: Chain G: E.203, H.205, H.209, Q.243 4 PLIP interactions: 3 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:E.203, G:H.205, G:H.209, H2O.16 MN.8: 4 residues within 4Å: Chain H: E.203, H.205, H.209, Q.243 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:E.203, H:E.203, H:H.205, H:H.209

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shin, I. et al., Structural and functional insights into (S)-ureidoglycine aminohydrolase, key enzyme of purine catabolism in Arabidopsis thaliana. J.Biol.Chem. (2012)

Release Date

2012-04-18

Peptides

Ureidoglycine aminohydrolase: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
G

F
I

G
J

H
K

Ureidoglycine aminohydrolase

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