SMTL ID : 4e42.2 (1 other biounit)

Structural basis for the recognition of mutant self by a tumor-specific, MHC class II-restricted T cell receptor G4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 6 residues within 4Å: Chain B: W.155, V.156, N.157, G.158, H.202, R.204 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.158, B:G.158, B:H.202, B:R.204

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain B: T.3, Q.4, S.5 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain B: G.64, N.75 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain B: H.8, R.105, L.107, P.147, H.149 Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain B: R.65, Q.66, F.67 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.6: 5 residues within 4Å: Chain B: D.148, H.149, V.150, P.171, L.185 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.148, B:H.149, B:V.150

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deng, L. et al., Structural basis for the recognition of mutant self by a tumor-specific, MHC class II-restricted T cell receptor G4. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-08-29

Peptides

T cell receptor G4 alpha chain: A
T cell receptor G4 beta chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

T cell receptor G4 alpha chain

T cell receptor G4 beta chain

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