SMTL ID : 4e4r.1

EutD phosphotransacetylase from Staphylococcus aureus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

homo-dimer

Ligands

2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 10 residues within 4Å: Chain A: G.127, A.129, T.132, G.133, D.134, T.135, D.308, L.309, S.310, R.311 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:A.129, A:T.135, A:L.309 Water bridges: A:D.134, A:D.308, A:D.308, A:R.311, A:R.311 TRS.10: 10 residues within 4Å: Chain B: G.127, A.129, T.132, G.133, D.134, T.135, D.308, L.309, S.310, R.311 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:A.129, B:T.135, B:L.309 Water bridges: B:D.134, B:D.134, B:R.311, B:R.311

10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: R.151, T.152, N.173, L.176, G.180, E.183, I.184 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.151, A:R.151, A:R.151 Water bridges: A:S.150, A:S.150 EDO.3: 2 residues within 4Å: Chain A: T.77, S.78 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.78 Water bridges: A:A.82 EDO.4: 5 residues within 4Å: Chain A: K.21, I.48, E.71, L.80, K.120 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.21 EDO.5: 5 residues within 4Å: Chain A: A.171, N.280 Chain B: F.206, A.212, Q.245 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:A.171 Water bridges: B:F.206, B:S.211 EDO.6: 2 residues within 4Å: Chain A: N.19, D.122 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.19 Water bridges: A:D.122 EDO.11: 7 residues within 4Å: Chain B: R.151, T.152, N.173, L.176, G.180, E.183, I.184 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:R.151, B:R.151, B:R.151, B:E.183 Water bridges: B:S.150, B:S.150 EDO.12: 2 residues within 4Å: Chain B: T.77, S.78 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.78 Water bridges: B:A.82 EDO.13: 5 residues within 4Å: Chain B: K.21, I.48, E.71, L.80, K.120 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.21 EDO.14: 5 residues within 4Å: Chain A: F.206, A.212, Q.245 Chain B: A.171, N.280 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:A.171 Water bridges: A:F.206, A:S.211 EDO.15: 2 residues within 4Å: Chain B: N.19, D.122 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.19

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 3 residues within 4Å: Chain A: Q.228, I.239, I.240 Ligand excluded by PLIP CL.8: 6 residues within 4Å: Chain A: S.205, Q.245, F.246 Chain B: N.280, I.281, K.284 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain A: L.309, S.310, C.313, D.317 Ligand excluded by PLIP CL.16: 3 residues within 4Å: Chain B: Q.228, I.239, I.240 Ligand excluded by PLIP CL.17: 6 residues within 4Å: Chain A: N.280, I.281, K.284 Chain B: S.205, Q.245, F.246 Ligand excluded by PLIP CL.18: 4 residues within 4Å: Chain B: L.309, S.310, C.313, D.317 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., EutD phosphotransacetylase from Staphylococcus aureus. To be Published

Release Date

2012-03-28

Peptides

Phosphate acetyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Phosphate acetyltransferase