SMTL ID : 4e9c.1

The structure of the polo-box domain (PBD) of polo-like kinase 1 (Plk1) in complex with LDPPLHSpTA phosphopeptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

2 x PG0: 2-(2-METHOXYETHOXY)ETHANOL(Non-functional Binders)

PG0.1: 5 residues within 4Å: Chain A: Y.55, Y.59, Y.119, F.120, Y.123 No protein-ligand interaction detected (PLIP) PG0.2: 4 residues within 4Å: Chain A: D.14, Q.17, Q.18, P.183 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.18, A:P.183

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: F.173, H.176 Chain B: P.5, H.7, S.8, T.9 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sledz, P. et al., High-throughput interrogation of ligand binding mode using a fluorescence-based assay. Angew. Chem. Int. Ed. Engl. (2012)

Release Date

2012-10-10

Peptides

Serine/threonine-protein kinase PLK1: A
LDPPLHSpTA phosphopeptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase PLK1

LDPPLHSpTA phosphopeptide

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