SMTL ID : 4ea3.1 (2 other biounits)

Structure of the N/OFQ Opioid Receptor in Complex with a Peptide Mimetic

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.01 Å

Oligo State

homo-dimer

Ligands

2 x 0NN: 1-benzyl-N-[3-(1'H,3H-spiro[2-benzofuran-1,4'-piperidin]-1'-yl)propyl]-D-prolinamide(Non-covalent)

0NN.1: 16 residues within 4Å: Chain A: Q.181, D.184, I.201, D.204, Y.205, M.208, F.209, C.274, L.275, I.293, S.297, W.350, Q.354, V.357, T.379, Y.383 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.201, A:Y.205, A:Y.205, A:M.208, A:F.209, A:I.293, A:W.350 Hydrogen bonds: A:Q.181 Salt bridges: A:D.204 0NN.4: 18 residues within 4Å: Chain B: Q.181, D.184, V.200, I.201, D.204, Y.205, M.208, F.209, C.274, L.275, I.293, S.297, W.350, V.353, Q.354, V.357, T.379, Y.383 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:D.184, B:I.201, B:Y.205, B:M.208, B:F.209, B:I.293 Hydrogen bonds: B:Q.181 Salt bridges: B:D.184, B:D.204

1 x OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLB.2: 7 residues within 4Å: Chain A: Y.163, F.213, A.217, V.220, D.221, V.224, L.251 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.213, A:A.217, A:L.251 Hydrogen bonds: A:Y.163

1 x OLA: OLEIC ACID(Non-covalent)

OLA.3: 6 residues within 4Å: Chain A: V.129, T.183, L.186, L.187, F.189, P.191 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.129, A:T.183, A:L.186, A:L.187, A:L.187, A:F.189, A:F.189, A:P.191

1 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.5: 11 residues within 4Å: Chain A: V.355, A.359, L.362, V.364 Chain B: Y.163, F.213, A.217, V.220, D.221, V.235, K.240 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:V.355, A:A.359 Hydrogen bonds: A:L.362, B:D.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thompson, A.A. et al., Structure of the nociceptin/orphanin FQ receptor in complex with a peptide mimetic. Nature (2012)

Release Date

2012-04-25

Peptides

Fusion protein of Nociceptin receptor and cytochrome b562: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Fusion protein of Nociceptin receptor and cytochrome b562

Related Entries With Identical Sequence