SMTL ID : 4ed9.1

Crystal structure of a CAIB/BAIF family protein from Brucella suis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 7 residues within 4Å: Chain A: R.144, M.150, M.154 Chain B: A.321, P.323 Ligands: PEG.2, EDO.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.144 PEG.2: 3 residues within 4Å: Chain A: R.144 Chain B: A.315 Ligands: PEG.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.144, A:R.144 Water bridges: A:Y.141, A:Y.141 PEG.6: 7 residues within 4Å: Chain A: A.321, P.323 Chain B: R.144, M.150, M.154 Ligands: PEG.7, EDO.10 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.144 PEG.7: 3 residues within 4Å: Chain A: A.315 Chain B: R.144 Ligands: PEG.6 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.144, B:R.144 Water bridges: B:Y.141

2 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)

NHE.3: 3 residues within 4Å: Chain A: D.37, R.76, E.381 No protein-ligand interaction detected (PLIP) NHE.8: 3 residues within 4Å: Chain B: D.37, R.76, E.381 No protein-ligand interaction detected (PLIP)

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 9 residues within 4Å: Chain A: E.103, K.106, L.107, G.108, D.116, Y.117, Y.129, S.131, H.137 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.106, A:G.108, A:Y.117, A:Y.129 Water bridges: A:L.110, A:D.111, A:E.118 EDO.5: 3 residues within 4Å: Chain A: E.143, R.144 Ligands: PEG.1 No protein-ligand interaction detected (PLIP) EDO.9: 9 residues within 4Å: Chain B: E.103, K.106, L.107, G.108, D.116, Y.117, Y.129, S.131, H.137 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:K.106, B:G.108, B:Y.117, B:Y.129 Water bridges: B:L.110, B:E.118 EDO.10: 3 residues within 4Å: Chain B: E.143, R.144 Ligands: PEG.6 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seattle Structural Genomics Center for Infectious Disease (SSGCID) et al., Crystal structure of a CAIB/BAIF family protein from Brucella suis. To be Published

Release Date

2012-04-25

Peptides

CAIB/BAIF family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

CAIB/BAIF family protein