SMTL ID : 4eef.2 (3 other biounits)

Crystal structure of the designed inhibitor protein F-HB80.4 in complex with the 1918 influenza virus hemagglutinin.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 7 residues within 4Å: Chain A: N.68, E.70, E.90, N.91, C.94, S.141, R.225 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Whitehead, T.A. et al., Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing. Nat.Biotechnol. (2012)

Release Date

2012-06-27

Peptides

Hemagglutinin HA1 chain: A
Hemagglutinin HA2 chain: B
F-HB80.4, DESIGNED HEMAGGLUTININ BINDING PROTEIN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
H

Hemagglutinin HA1 chain

Hemagglutinin HA2 chain

F-HB80.4, DESIGNED HEMAGGLUTININ BINDING PROTEIN

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