SMTL ID : 4eh8.1

Human p38 MAP kinase in complex with NP-F7 and RL87

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x IRG: N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine(Non-covalent)

IRG.1: 11 residues within 4Å: Chain A: P.191, E.192, L.195, W.197, L.246, K.249, S.251, S.252, A.255, D.292, D.294 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:P.191, A:L.195, A:W.197, A:W.197, A:L.246, A:L.246, A:A.255 Hydrogen bonds: A:D.294 pi-Stacking: A:W.197, A:W.197, A:W.197

2 x 0OP: [3-(benzyloxy)phenyl]methanol(Non-covalent)

0OP.2: 13 residues within 4Å: Chain A: K.53, E.71, L.74, L.75, V.83, I.84, I.141, I.146, H.148, I.166, D.168, F.169 Ligands: 0OP.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:E.71, A:L.75, A:V.83, A:I.141, A:I.166, A:D.168, A:F.169 Hydrogen bonds: A:H.148, A:D.168 0OP.3: 11 residues within 4Å: Chain A: V.38, A.51, K.53, L.75, I.84, T.106, H.107, L.108, M.109, D.168 Ligands: 0OP.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.38, A:A.51, A:K.53, A:I.84, A:T.106, A:L.108, A:M.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Over, B. et al., Natural-product-derived fragments for fragment-based ligand discovery. Nat Chem (2012)

Release Date

2012-12-05

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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