SMTL ID : 4ehe.1

B-Raf Kinase Domain in Complex with an Aminothienopyrimidine-based Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-dimer

Ligands

2 x RI8: 4-amino-N-{2,6-difluoro-3-[(propylsulfonyl)amino]phenyl}thieno[3,2-d]pyrimidine-7-carboxamide(Non-covalent)

RI8.1: 17 residues within 4Å: Chain A: V.52, A.62, V.63, K.64, L.86, L.95, F.97, I.108, T.110, Q.111, W.112, C.113, F.164, G.174, D.175, F.176, G.177 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:V.52, A:K.64, A:L.86, A:L.95, A:F.97, A:I.108, A:T.110, A:F.176 Hydrogen bonds: A:K.64, A:T.110, A:C.113, A:C.113, A:D.175, A:F.176, A:G.177 pi-Cation interactions: A:K.64 RI8.2: 16 residues within 4Å: Chain B: V.52, A.62, V.63, K.64, L.86, L.95, I.108, T.110, Q.111, W.112, C.113, F.164, G.174, D.175, F.176, G.177 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:V.52, B:K.64, B:I.108, B:T.110, B:F.176 Hydrogen bonds: B:K.64, B:C.113, B:C.113, B:D.175, B:F.176, B:G.177 pi-Cation interactions: B:K.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mathieu, S. et al., Potent and selective aminopyrimidine-based B-raf inhibitors with favorable physicochemical and pharmacokinetic properties. J.Med.Chem. (2012)

Release Date

2013-04-24

Peptides

Serine/threonine-protein kinase B-raf: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase B-raf

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