- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-functional Binders)
- 3 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 4 residues within 4Å:- Chain A: I.139, I.140, E.141, L.176
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:L.176
- Water bridges: A:L.176
ACT.7: 8 residues within 4Å:- Chain A: S.151, M.152, S.154, A.187, H.190, G.221, R.224, R.228
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:A.187
- Water bridges: A:H.190
- Salt bridges: A:R.224
ACT.10: 4 residues within 4Å:- Chain B: R.131, D.134, V.135, K.138
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:K.138
- Water bridges: B:R.131, B:R.131
- Salt bridges: B:R.131
- 3 x NA: SODIUM ION(Non-functional Binders)
NA.5: 5 residues within 4Å:- Chain A: T.11, A.12, S.31, Q.241
- Ligands: ANP.2
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.31, A:Q.241
- Water bridges: A:S.31
NA.6: 5 residues within 4Å:- Chain A: R.218, I.239, P.240, Q.241, L.242
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.241
- Water bridges: A:R.218, A:D.238, A:Q.241
NA.11: 5 residues within 4Å:- Chain B: R.218, I.239, P.240, Q.241, L.242
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:I.239, B:Q.241
- Water bridges: B:R.218
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Knauer, S.H. et al., On the ATP-Dependent Activation of the Radical Enzyme (R)-2-Hydroxyisocaproyl-CoA Dehydratase. Biochemistry (2012)
- Release Date
- 2012-08-08
- Peptides
- Activator of 2-hydroxyisocaproyl-CoA dehydratase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-functional Binders)
- 3 x ACT: ACETATE ION(Non-functional Binders)
- 3 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Knauer, S.H. et al., On the ATP-Dependent Activation of the Radical Enzyme (R)-2-Hydroxyisocaproyl-CoA Dehydratase. Biochemistry (2012)
- Release Date
- 2012-08-08
- Peptides
- Activator of 2-hydroxyisocaproyl-CoA dehydratase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B