SMTL ID : 4ej6.1

Crystal structure of a putative zinc-binding dehydrogenase (Target PSI-012003) from Sinorhizobium meliloti 1021

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

17 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: D.106, K.148, Q.149, F.151, F.314 Ligand excluded by PLIP EDO.2: 3 residues within 4Å: Chain A: E.295, F.297, D.298 Ligand excluded by PLIP EDO.3: 3 residues within 4Å: Chain A: R.220, R.221, E.224 Ligand excluded by PLIP EDO.4: 4 residues within 4Å: Chain A: H.65, F.71, P.287, Q.288 Ligand excluded by PLIP EDO.5: 2 residues within 4Å: Chain A: E.55, P.159 Ligand excluded by PLIP EDO.6: 5 residues within 4Å: Chain A: Q.200, R.203, L.204, V.226, G.227 Ligand excluded by PLIP EDO.7: 5 residues within 4Å: Chain A: G.190, G.191, T.214, R.215, Q.216 Ligand excluded by PLIP EDO.8: 5 residues within 4Å: Chain A: T.74, P.76, V.77, H.134, D.136 Ligand excluded by PLIP EDO.9: 4 residues within 4Å: Chain A: G.252, K.275, A.276, R.302 Ligand excluded by PLIP EDO.10: 4 residues within 4Å: Chain A: T.218, R.221, L.222, E.225 Ligand excluded by PLIP EDO.11: 4 residues within 4Å: Chain A: L.222, D.331, R.332, I.334 Ligand excluded by PLIP EDO.12: 6 residues within 4Å: Chain A: V.240, E.241, A.244, G.245, P.246 Ligands: EDO.15 Ligand excluded by PLIP EDO.13: 1 residues within 4Å: Chain A: L.124 Ligand excluded by PLIP EDO.14: 4 residues within 4Å: Chain A: S.36, V.37, D.341, P.344 Ligand excluded by PLIP EDO.15: 4 residues within 4Å: Chain A: R.272, D.298, R.302 Ligands: EDO.12 Ligand excluded by PLIP EDO.16: 2 residues within 4Å: Chain A: D.255, K.275 Ligand excluded by PLIP EDO.17: 3 residues within 4Å: Chain A: E.152, I.153, P.154 Ligand excluded by PLIP

1 x ZN: ZINC ION(Non-covalent)

ZN.18: 5 residues within 4Å: Chain A: C.111, G.112, C.114, C.117, C.125 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.111, A:C.114, A:C.117, A:C.125

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.19: 5 residues within 4Å: Chain A: G.190, G.191, G.192, G.195, C.260 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sampathkumar, P. et al., Crystal structure of a putative zinc-binding dehydrogenase from Sinorhizobium meliloti 1021. To be Published

Release Date

2012-05-02

Peptides

Putative zinc-binding dehydrogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative zinc-binding dehydrogenase

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