SMTL ID : 4ekg.1

Crystal Structure of DOT1L in Complex with EPZ003696

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x 0QJ: 5'-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(methyl)amino]-5'-deoxyadenosine(Non-covalent)

0QJ.1: 21 residues within 4Å: Chain A: V.144, Y.145, L.152, M.156, D.170, G.172, S.173, G.174, V.178, E.195, K.196, A.197, G.230, D.231, F.232, F.248, V.249, N.250, S.277, S.278, Y.321 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.152, A:F.248, A:N.250, A:Y.321, A:Y.321 Hydrogen bonds: A:D.170, A:D.170, A:K.196, A:D.231, A:F.232, A:N.250 Water bridges: A:N.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Basavapathruni, A. et al., Conformational adaptation drives potent, selective and durable inhibition of the human protein methyltransferase DOT1L. Chem.Biol.Drug Des. (2012)

Release Date

2012-10-17

Peptides

Histone-lysine N-methyltransferase, H3 lysine-79 specific: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase, H3 lysine-79 specific

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