SMTL ID : 4em2.2 (1 other biounit)

seleno-methionine staphylococcus aureus MarR in complex with salicylate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

homo-dimer

Ligands

8 x SAL: 2-HYDROXYBENZOIC ACID(Non-covalent)

SAL.1: 9 residues within 4Å: Chain A: F.6, Y.46, L.50, Y.64, L.68, R.71 Chain B: I.43, R.47 Ligands: SAL.2 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.6, A:Y.46, A:L.50, A:L.50, A:Y.64, A:L.68, B:I.43 Hydrogen bonds: A:Y.46, A:R.71, A:R.71 SAL.2: 10 residues within 4Å: Chain A: Y.49, T.53, L.57, Y.64, W.67, R.71, V.135, V.139, Q.143 Ligands: SAL.1 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.49, A:T.53, A:L.57, A:Y.64, A:V.135, A:V.139, A:V.139 Hydrogen bonds: A:Y.49, A:R.71, A:Q.143 Water bridges: A:R.71 Salt bridges: A:R.71 SAL.3: 6 residues within 4Å: Chain A: R.96, K.100, I.103, V.110, K.117, L.122 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.103, A:V.110, A:K.117, A:L.122 Salt bridges: A:K.117 SAL.4: 9 residues within 4Å: Chain A: F.6, G.65, L.68, I.69, R.88, I.90, T.94, T.98 Chain B: E.7 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.6, A:I.69, A:I.90, A:T.94 Salt bridges: A:R.88 SAL.7: 9 residues within 4Å: Chain A: I.43, R.47 Chain B: F.6, Y.46, L.50, Y.64, L.68, R.71 Ligands: SAL.8 11 PLIP interactions: 10 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:F.6, B:Y.46, B:L.50, B:L.50, B:Y.64, B:L.68, A:I.43 Hydrogen bonds: B:Y.46, B:Y.46, B:R.71, B:R.71 SAL.8: 10 residues within 4Å: Chain B: Y.49, T.53, L.57, Y.64, W.67, R.71, V.135, V.139, Q.143 Ligands: SAL.7 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:Y.49, B:T.53, B:L.57, B:Y.64, B:V.135, B:V.139, B:V.139 Hydrogen bonds: B:Y.49, B:Y.49, B:R.71, B:Q.143 Water bridges: B:R.71 Salt bridges: B:R.71 SAL.9: 6 residues within 4Å: Chain B: R.96, K.100, I.103, V.110, K.117, L.122 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:I.103, B:V.110, B:K.117, B:L.122 Salt bridges: B:K.117 SAL.10: 9 residues within 4Å: Chain A: E.7 Chain B: F.6, G.65, L.68, I.69, R.88, I.90, T.94, T.98 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:F.6, B:I.69, B:I.90, B:T.94 Salt bridges: B:R.88

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 4 residues within 4Å: Chain A: R.96, D.116, K.117, R.118 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.116, A:K.117, A:R.118 Salt bridges: A:R.96, A:K.117, A:R.118 SO4.6: 3 residues within 4Å: Chain A: I.152, S.153, Q.154 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.154, A:Q.154 SO4.11: 4 residues within 4Å: Chain B: R.96, D.116, K.117, R.118 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:D.116, B:D.116, B:K.117, B:R.118 Salt bridges: B:R.96, B:K.117, B:R.118 SO4.12: 3 residues within 4Å: Chain B: I.152, S.153, Q.154 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.154, B:Q.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, Y.M. et al., Staphylococcus aureus MarR complexes. To be Published

Release Date

2013-04-17

Peptides

Uncharacterized HTH-type transcriptional regulator SAR2349: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Uncharacterized HTH-type transcriptional regulator SAR2349

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