SMTL ID : 4en0.1

Crystal structure of light

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

homo-trimer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: G.66, Y.67, M.166, V.167 Chain B: R.51 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A Salt bridges: B:R.51 Hydrogen bonds: A:Y.67, A:V.167, A:V.167

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 11 residues within 4Å: Chain A: Q.111, S.127, S.128, F.129 Chain B: Q.111, S.127, F.129 Chain C: Q.111, S.127, S.128, F.129 6 PLIP interactions: 4 interactions with chain A, 1 interactions with chain C, 1 interactions with chain B Hydrogen bonds: A:S.127, A:F.129, C:F.129, B:Q.111 Water bridges: A:Q.111, A:Q.111

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 3 residues within 4Å: Chain A: N.29, S.31, L.40 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.29, A:S.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, W. et al., Mechanistic basis for functional promiscuity in the TNF and TNF receptor superfamilies: structure of the LIGHT:DcR3 assembly. Structure (2014)

Release Date

2012-05-09

Peptides

Tumor necrosis factor ligand superfamily member 14: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Tumor necrosis factor ligand superfamily member 14

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