SMTL ID : 4en3.1

Crystal structure of a human Valpha24(-) NKT TCR in complex with CD1d/alpha-galactosylceramide

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.57 Å
Oligo State
hetero-1-1-1-1-mer
Ligands
5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Non-functional Binders)
1 x AGH: N-{(1S,2R,3S)-1-[(ALPHA-D-GALACTOPYRANOSYLOXY)METHYL]-2,3-DIHYDROXYHEPTADECYL}HEXACOSANAMIDE(Non-covalent)
1 x FUC: alpha-L-fucopyranose(Non-functional Binders)
2 x GOL: GLYCEROL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Lopez-Sagaseta, J. et al., The Molecular Basis for Recognition of CD1d/alpha-Galactosylceramide by a Human Non-Valpha24 T Cell Receptor Struct. Title. Plos Biol. (2012)
Release Date
2012-10-31
Peptides
Antigen-presenting glycoprotein CD1d: A
HUMAN NKT TCR ALPHA CHAIN: B
HUMAN NKT TCR BETA CHAIN: C
Beta-2-microglobulin: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
A
C
B
D
D

Antigen-presenting glycoprotein CD1d

HUMAN NKT TCR ALPHA CHAIN

HUMAN NKT TCR BETA CHAIN

Beta-2-microglobulin