SMTL ID : 4eoj.1 (1 other biounit)

Thr 160 phosphorylated CDK2 H84S, Q85M, K89D - human cyclin A3 complex with ATP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

hetero-oligomer

Ligands

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 18 residues within 4Å: Chain A: I.14, G.15, E.16, G.17, T.18, A.35, K.37, V.68, F.84, E.85, F.86, L.87, D.90, Q.135, N.136, L.138, D.149 Ligands: MG.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:T.18, A:T.18, A:E.85, A:L.87, A:D.90, A:N.136, A:D.149 Water bridges: A:K.37, A:D.149 Salt bridges: A:K.37, A:K.133

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.136, D.149 Ligands: ATP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.149 MG.3: 3 residues within 4Å: Chain B: M.26, Q.29, I.32 6 PLIP interactions: 3 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:M.26, B:Q.29, B:I.32, H2O.347, H2O.351, H2O.404

2 x SGM: MONOTHIOGLYCEROL(Non-covalent)

SGM.4: 5 residues within 4Å: Chain B: M.15, K.18, C.19, R.67, D.131 No protein-ligand interaction detected (PLIP) SGM.5: 2 residues within 4Å: Chain B: C.153, E.156 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Echalier, A. et al., An integrated chemical biology approach provides insight into Cdk2 functional redundancy and inhibitor sensitivity. Chem.Biol. (2012)

Release Date

2013-02-06

Peptides

Cyclin-dependent kinase 2: A
Cyclin-A2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cyclin-dependent kinase 2

Cyclin-A2

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