SMTL ID : 4eot.1

Crystal structure of the MafA homodimer bound to the consensus MARE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.86 Å

Oligo State

homo-dimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: D.6, R.42 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.42 SO4.2: 8 residues within 4Å: Chain A: R.49, R.52 Chain B: R.49, R.52 Chain C: A.10, G.11 Chain D: A.9, C.10 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Salt bridges: A:R.49, A:R.52, B:R.49, B:R.52 SO4.3: 3 residues within 4Å: Chain A: E.76, R.79 Chain B: R.84 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:E.76 Salt bridges: A:R.79, B:R.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, X. et al., A Novel DNA Binding Mechanism for maf Basic Region-Leucine Zipper Factors Inferred from a MafA-DNA Complex Structure and Binding Specificities. Biochemistry (2012)

Release Date

2012-11-28

Peptides

Transcription factor MafA: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcription factor MafA