SMTL ID : 4eph.1

CRYSTAL STRUCTURE OF RAT CARNITINE PALMITOYLTRANSFERASE 2 IN COMPLEX with CoA-site inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 0RK: 2-chloro-4-[({1-[(5-chloro-2-methoxyphenyl)sulfonyl]-4-methyl-2,3-dihydro-1H-indol-6-yl}carbonyl)amino]benzoic acid(Non-covalent)

0RK.1: 17 residues within 4Å: Chain A: H.367, D.371, G.372, V.373, L.376, K.448, D.459, E.482, S.483, C.484, S.485, T.494, S.585, T.586, L.587, N.588 Ligands: BOG.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.587 Hydrogen bonds: A:G.372, A:K.448, A:S.483, A:S.485, A:T.586, A:N.588 Water bridges: A:T.586 Salt bridges: A:H.367

1 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.2: 16 residues within 4Å: Chain A: N.125, F.126, P.128, F.129, H.367, Y.481, S.583, T.584, S.585, L.587, G.595, F.597, V.600, A.608, Y.609 Ligands: 0RK.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:P.128, A:A.608 Hydrogen bonds: A:F.126, A:S.583, A:S.585 Water bridges: A:N.125, A:P.599 Salt bridges: A:H.367

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Perspicace, S. et al., Isothermal titration calorimetry with micelles: Thermodynamics of inhibitor binding to carnitine palmitoyltransferase 2 membrane protein. FEBS Open Bio (2013)

Release Date

2013-04-17

Peptides

Carnitine O-palmitoyltransferase 2, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carnitine O-palmitoyltransferase 2, mitochondrial

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