SMTL ID : 4eq5.1

DNA ligase from the archaeon Thermococcus sibiricus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 15 residues within 4Å: Chain A: L.238, A.239, E.259, I.260, K.261, Y.262, R.266, R.281, E.311, F.351, M.413, K.415, R.426, K.432, E.438 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:A.239, A:E.259, A:E.259, A:Y.262, A:R.266, A:K.415, A:E.438 Salt bridges: A:R.281, A:R.426, A:K.432 pi-Stacking: A:F.351

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petrova, T.E. et al., Expression, purification, crystallization and preliminary crystallographic analysis of a thermostable DNA ligase from the archaeon Thermococcus sibiricus. Acta Crystallogr.,Sect.F (2012)

Release Date

2012-05-09

Peptides

DNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA ligase