SMTL ID : 4ero.1

Study on structure and function relationships in human Pirin with Cobalt ion

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

1 x CO: COBALT (II) ION(Non-covalent)

CO.1: 4 residues within 4Å: Chain A: H.56, H.58, H.101, E.103 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.56, A:H.58, A:H.101, A:E.103

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: E.15, R.23, V.24, R.25, E.44, K.46 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.23, A:R.25, A:K.46 EDO.3: 6 residues within 4Å: Chain A: K.141, T.148, A.150, D.173, F.174, K.175 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.237 EDO.4: 5 residues within 4Å: Chain A: K.144, D.145, V.147, K.181, H.182 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.145, A:H.182 EDO.5: 5 residues within 4Å: Chain A: V.24, R.26, D.43, Q.115, W.117 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, F. et al., Pirin is an iron-dependent redox regulator of NF-kappa B. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-05-29

Peptides

Pirin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pirin

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