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SMTL ID : 4eu6.1
Succinyl-CoA:acetate CoA-transferase (AarCH6) in complex with CoA, acetate, and covalent acetylglutamyl anhydride and glutamyl-CoA thioester adducts
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.99 Å
Oligo State
homo-dimer
Ligands
2 x
COA
:
COENZYME A
(Non-covalent)
(Covalent)
COA.1:
24 residues within 4Å:
Chain A:
F.92
,
Q.267
,
G.269
,
V.270
,
G.271
,
N.272
,
V.273
,
E.294
,
N.361
,
G.362
,
M.363
,
I.364
,
S.374
,
V.377
,
M.383
,
N.384
,
G.385
,
I.386
,
G.388
,
S.389
,
P.404
,
A.407
,
I.412
Ligands:
ACT.4
17
PLIP interactions
:
17 interactions with chain A
Hydrophobic interactions:
A:F.92
,
A:V.270
,
A:I.364
Hydrogen bonds:
A:N.272
,
A:N.272
,
A:G.362
,
A:I.364
,
A:N.384
,
A:G.388
,
A:S.389
Water bridges:
A:V.270
,
A:V.273
,
A:G.385
,
A:G.385
,
A:S.389
,
A:S.389
,
A:K.408
COA.5:
24 residues within 4Å:
Chain B:
F.92
,
Q.267
,
G.269
,
V.270
,
G.271
,
N.272
,
V.273
,
E.294
,
N.361
,
G.362
,
M.363
,
I.364
,
S.374
,
V.377
,
M.383
,
N.384
,
G.385
,
I.386
,
G.388
,
S.389
,
P.404
,
A.407
,
K.408
,
I.412
16
PLIP interactions
:
16 interactions with chain B
Hydrophobic interactions:
B:F.92
,
B:V.270
Hydrogen bonds:
B:N.272
,
B:N.272
,
B:I.364
,
B:N.384
,
B:G.388
,
B:S.389
,
B:K.408
Water bridges:
B:V.270
,
B:V.270
,
B:A.274
,
B:S.374
,
B:G.385
,
B:S.389
Salt bridges:
B:K.408
4 x
CL
:
CHLORIDE ION
(Non-functional Binders)
CL.2:
4 residues within 4Å:
Chain A:
N.112
,
R.120
,
N.125
Chain B:
G.443
Ligand excluded by PLIP
CL.3:
4 residues within 4Å:
Chain A:
I.195
,
V.196
,
R.354
Chain B:
R.354
Ligand excluded by PLIP
CL.6:
4 residues within 4Å:
Chain A:
G.443
Chain B:
N.112
,
R.120
,
N.125
Ligand excluded by PLIP
CL.7:
4 residues within 4Å:
Chain A:
R.354
Chain B:
I.195
,
V.196
,
R.354
Ligand excluded by PLIP
2 x
ACT
:
ACETATE ION
(Non-functional Binders)
ACT.4:
8 residues within 4Å:
Chain A:
T.36
,
F.92
,
L.114
,
V.270
,
E.294
,
G.387
,
G.388
Ligands:
COA.1
5
PLIP interactions
:
5 interactions with chain A
Hydrophobic interactions:
A:T.36
,
A:F.92
,
A:L.114
,
A:V.270
Hydrogen bonds:
A:G.388
ACT.8:
6 residues within 4Å:
Chain B:
T.36
,
G.37
,
S.71
,
F.92
,
T.94
,
R.228
2
PLIP interactions
:
2 interactions with chain B
Hydrogen bonds:
B:S.71
Salt bridges:
B:R.228
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Mullins, E.A. et al., Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases. Biochemistry (2012)
Release Date
2012-10-10
Peptides
Succinyl-CoA:acetate coenzyme A transferase:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
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2° Structure
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Succinyl-CoA:acetate coenzyme A transferase
Related Entries With Identical Sequence
4eu3.1
|
4eu4.1
|
4eu5.1
|
4eu7.1
|
5dw4.1
|
5dw5.1
|
5dw6.1
|
5e5h.1
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme