SMTL ID : 4f1n.1 (1 other biounit)

Crystal structure of Kluyveromyces polysporus Argonaute with a guide RNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.19 Å

Oligo State

monomer

Ligands

1 x U- A- A- A- A- A- A- A- A: RNA 5'-R(P*UP*AP*AP*AP*AP*AP*AP*AP*A)-3'(Non-covalent)

U-A-A-A-A-A-A-A-A.1: 44 residues within 4Å: Chain A: Q.239, K.242, P.284, Y.476, I.477, S.480, A.481, L.688, G.691, N.692, D.693, S.694, Y.697, K.701, S.713, C.714, V.715, V.716, N.719, Q.726, Y.727, N.730, V.731, K.734, K.738, R.888, R.892, H.939, Q.940, A.941, L.942, K.943, T.945, G.946, V.947, F.976, R.978, S.979, T.981, V.983, K.984, Y.990, R.998, I.1046 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakanishi, K. et al., Structure of yeast Argonaute with guide RNA. Nature (2012)

Release Date

2012-06-13

Peptides

KpAGO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

KpAGO

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