SMTL ID : 4f3d.1

Structure of RPE65: P65 crystal form grown in Fos-Choline-10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.180, H.241, H.313, H.527 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.180, A:H.241, A:H.313, A:H.527 FE2.4: 4 residues within 4Å: Chain B: H.180, H.241, H.313, H.527 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.180, B:H.241, B:H.313, B:H.527

3 x ETX: 2-ETHOXYETHANOL(Non-covalent)

ETX.2: 7 residues within 4Å: Chain A: Y.137, G.176, A.177, N.191, I.192, G.193, V.207 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.177, A:V.207 Hydrogen bonds: A:Y.137, A:Y.137, A:N.191 ETX.3: 7 residues within 4Å: Chain A: I.183, E.184, N.185, L.245, Y.423, Q.424, G.427 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.245 ETX.5: 6 residues within 4Å: Chain B: Y.137, V.174, G.176, A.177, N.191, V.207 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:V.174, B:A.177, B:V.207 Hydrogen bonds: B:Y.137, B:N.191 Water bridges: B:Y.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kiser, P.D. et al., Structure of RPE65 isomerase in a lipidic matrix reveals roles for phospholipids and iron in catalysis. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-10-03

Peptides

Retinoid isomerohydrolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Retinoid isomerohydrolase

Related Entries With Identical Sequence