SMTL ID : 4f3h.1

The structural of FimXEAL-c-di-GMP from Xanthomonas campestris

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x C2E: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)(Covalent)

C2E.1: 19 residues within 4Å: Chain A: Q.29, Q.43, A.44, F.45, L.46, R.47, S.56, P.57, N.58, M.61, D.74, V.77, R.100, E.219, F.220, Q.239, G.240, D.241, T.246 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:Q.29, A:Q.43, A:L.46, A:N.58, A:R.100, A:R.100, A:E.219, A:F.220, A:Q.239, A:D.241, A:T.246 Water bridges: A:Q.163 Salt bridges: A:R.47, A:D.74, A:R.100, A:E.219 pi-Stacking: A:F.220 pi-Cation interactions: A:R.100, A:F.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chin, K.-H. et al., Structural polymorphism of c-di-GMP bound to an EAL domain and in complex with a type II PilZ-domain protein. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-11-14

Peptides

Putative uncharacterized protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative uncharacterized protein

Related Entries With Identical Sequence