SMTL ID : 4f5t.1

Crystal Structure of Equine Serum Albumin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

monomer

Ligands

6 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 7 residues within 4Å: Chain A: L.218, K.221, F.222, L.237, I.289, A.290 Ligands: SO4.9 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.218, A:F.222 Water bridges: A:K.221, A:A.290 Salt bridges: A:K.221 ACT.2: 7 residues within 4Å: Chain A: L.386, N.390, L.406, R.409, Y.410, L.452 Ligands: GOL.15 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.452 Salt bridges: A:R.409 ACT.3: 6 residues within 4Å: Chain A: Y.149, S.191, K.194, E.195, K.198 Ligands: SO4.9 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.149 Water bridges: A:K.198, A:K.198, A:K.198 Salt bridges: A:K.198, A:H.241 ACT.4: 7 residues within 4Å: Chain A: Y.30, H.67, G.71, L.74, E.95, R.98, N.99 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.30, A:L.74 Hydrogen bonds: A:G.71 Salt bridges: A:H.67, A:R.98 ACT.5: 3 residues within 4Å: Chain A: H.105, K.106, D.107 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.107 Salt bridges: A:H.105 ACT.6: 4 residues within 4Å: Chain A: K.17, H.18, G.21, L.154 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.17, A:H.18

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.7: 4 residues within 4Å: Chain A: K.194, R.217, A.290, E.291 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:E.291 Water bridges: A:K.194, A:K.194, A:R.217, A:R.217, A:K.221 Salt bridges: A:K.194, A:R.217 SO4.8: 7 residues within 4Å: Chain A: S.341, S.343, L.344, R.347, P.383, E.449, R.484 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.341, A:S.343, A:S.343, A:E.449 Water bridges: A:R.347 Salt bridges: A:R.347, A:R.484 SO4.9: 7 residues within 4Å: Chain A: Y.149, L.237, H.241, R.256, A.290 Ligands: ACT.1, ACT.3 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.149, A:Y.149 Water bridges: A:R.256, A:R.256 Salt bridges: A:H.241, A:R.256 SO4.10: 3 residues within 4Å: Chain A: R.187, H.287, E.291 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.291 Water bridges: A:R.187, A:R.187 Salt bridges: A:H.287

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.11: 8 residues within 4Å: Chain A: D.108, R.144, H.145, P.146, Y.147, F.148, S.192, R.458 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.145, A:Y.147, A:F.148, A:R.458 Water bridges: A:L.189, A:S.192 GOL.12: 4 residues within 4Å: Chain A: K.412, A.538, T.539, K.540 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.540, A:K.540 Water bridges: A:T.539, A:E.541 GOL.13: 3 residues within 4Å: Chain A: A.303, L.304, A.305 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.304, A:A.305, A:R.336 GOL.14: 5 residues within 4Å: Chain A: V.417, S.418, T.419, K.499, K.533 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.419, A:T.419, A:K.533 Water bridges: A:Q.416, A:T.419, A:T.419, A:K.499 GOL.15: 6 residues within 4Å: Chain A: N.390, F.402, L.429, G.433, S.448 Ligands: ACT.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.390, A:N.390, A:S.448 GOL.16: 2 residues within 4Å: Chain A: K.535, A.583 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.535, A:A.583 GOL.17: 5 residues within 4Å: Chain A: N.204, C.460, E.464, C.476, T.477 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:C.460, A:E.464, A:T.477 Water bridges: A:S.200, A:E.464 GOL.18: 1 residues within 4Å: Chain A: H.266 1 PLIP interactions: 1 interactions with chain A Water bridges: A:H.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bujacz, A., Structures of bovine, equine and leporine serum albumin. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-10-03

Peptides

Serum albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serum albumin

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