SMTL ID : 4f62.1

Crystal structure of a putative farnesyl-diphosphate synthase from Marinomonas sp. MED121 (Target EFI-501980)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: A.132, Q.133, P.134, E.135, L.136 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.135, A:L.136

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: G.45, K.46, R.47, I.48, R.49, H.78 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.46, A:R.47, A:I.48, A:R.49, A:R.49 Water bridges: A:R.49 GOL.3: 5 residues within 4Å: Chain B: K.46, R.47, I.48, R.49, H.78 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.46, B:R.47, B:I.48, B:R.49

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 1 residues within 4Å: Chain B: T.130 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wallrapp, F.H. et al., Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2012-06-13

Peptides

Geranyltranstransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Geranyltranstransferase