SMTL ID : 4f7o.2 (1 other biounit)

Crystal structure of CSN5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.138, H.140, S.148, D.151 Chain D: S.254 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.138, A:H.140, A:D.151, A:D.151, H2O.1 ZN.4: 5 residues within 4Å: Chain B: H.138, H.140, S.148, D.151 Chain C: S.254 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.138, B:H.140, B:D.151, B:D.151, H2O.2 ZN.6: 5 residues within 4Å: Chain B: S.254 Chain C: H.138, H.140, S.148, D.151 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.138, C:H.140, C:D.151, C:D.151, H2O.3 ZN.9: 5 residues within 4Å: Chain A: S.254 Chain D: H.138, H.140, S.148, D.151 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:H.138, D:H.140, D:D.151, D:D.151, H2O.4

6 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.2: 5 residues within 4Å: Chain A: F.96, Y.120, R.129 Chain B: F.96, Y.120 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Y.120, A:R.129 SCN.3: 3 residues within 4Å: Chain A: R.70, K.244, Y.245 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.244 SCN.5: 1 residues within 4Å: Chain B: S.177 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.177 SCN.7: 5 residues within 4Å: Chain C: F.96, Y.120, R.129 Chain D: F.96, Y.120 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:R.129 SCN.8: 3 residues within 4Å: Chain C: R.70, K.244, Y.245 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:K.244 SCN.10: 1 residues within 4Å: Chain D: S.177 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:S.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Echalier, A. et al., Insights into the regulation of the human COP9 signalosome catalytic subunit, CSN5/Jab1. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-01-23

Peptides

COP9 signalosome complex subunit 5: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

COP9 signalosome complex subunit 5

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