SMTL ID : 4f7z.1

Conformational dynamics of exchange protein directly activated by cAMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

7 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: F.77, G.120, E.121, S.122, R.129, H.130, A.131 Ligands: GOL.4 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.120, A:S.122, A:S.122, A:R.129, A:H.130, A:H.130, A:A.131, A:A.131 GOL.2: 7 residues within 4Å: Chain A: T.244, Q.245, G.248, M.249, G.311, P.312, H.315 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.245 GOL.3: 4 residues within 4Å: Chain A: S.760, S.761, K.834, K.837 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.761, A:K.834, A:K.837, A:K.837 GOL.4: 10 residues within 4Å: Chain A: F.119, G.120, E.121, S.122, H.130, Y.168, V.399, V.400, C.401 Ligands: GOL.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.120, A:E.121, A:S.122, A:S.122, A:V.399 GOL.5: 2 residues within 4Å: Chain A: K.271, Y.272 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.272 GOL.6: 6 residues within 4Å: Chain A: P.651, R.653, N.777, C.778, V.779, H.780 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.653, A:R.653, A:C.778 Water bridges: A:R.953 GOL.7: 4 residues within 4Å: Chain A: H.923, K.927, T.928, K.938 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.923, A:T.928, A:K.938

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

White, M.A. et al., Structural analyses of a constitutively active mutant of exchange protein directly activated by cAMP. Plos One (2012)

Release Date

2012-10-03

Peptides

Rap guanine nucleotide exchange factor 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Rap guanine nucleotide exchange factor 4