SMTL ID : 4fab.1

THREE-DIMENSIONAL STRUCTURE OF A FLUORESCEIN-FAB COMPLEX CRYSTALLIZED IN 2-METHYL-2,4-PENTANEDIOL

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x FLU: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID(Non-covalent)

FLU.1: 9 residues within 4Å: Chain A: H.31, Y.37, R.39, S.96, W.101 Chain B: W.33, Y.56, Y.102, Y.103 12 PLIP interactions: 7 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:Y.37, A:Y.37, A:W.101, B:W.33, B:W.33, B:W.33, B:Y.103 Hydrogen bonds: A:H.31, A:Y.37, A:R.39, A:S.96 pi-Stacking: B:W.33

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 13 residues within 4Å: Chain A: R.39, Y.41, S.94, W.101, F.103 Chain B: N.35, V.37, T.99, G.100, S.101, D.106, Y.107, W.108 10 PLIP interactions: 4 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:V.37, B:T.99, A:W.101, A:W.101, A:F.103 Hydrogen bonds: B:N.35, B:T.99, A:R.39, A:Y.41, A:S.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Herron, J.N. et al., Three-dimensional structure of a fluorescein-Fab complex crystallized in 2-methyl-2,4-pentanediol. Proteins (1989)

Release Date

1990-07-15

Peptides

IGG2A-KAPPA 4-4-20 FAB (LIGHT CHAIN): A
IGG2A-KAPPA 4-4-20 FAB (HEAVY CHAIN): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

IGG2A-KAPPA 4-4-20 FAB (LIGHT CHAIN)

IGG2A-KAPPA 4-4-20 FAB (HEAVY CHAIN)