SMTL ID : 4fda.1

Crystal structure of Saccharomyces cerevisiae 3-oxoacyl-[acyl-carrier-protein] reductase complexed with NADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 22 residues within 4Å: Chain A: G.11, A.12, T.13, R.14, G.15, G.35, S.36, S.40, I.65, D.66, F.67, K.68, A.121, G.122, T.124, Q.125, E.126, V.143, S.183, G.194, T.195, Y.198 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:T.195 Hydrogen bonds: A:G.11, A:T.13, A:T.13, A:T.13, A:R.14, A:S.36, A:S.36, A:S.40, A:D.66, A:F.67, A:K.68, A:G.122, A:Q.125, A:E.126, A:S.183, A:G.194, A:Y.198 Water bridges: A:R.14, A:I.16, A:I.16, A:I.65, A:K.68, A:T.124 Salt bridges: A:R.14, A:R.14, A:R.14 pi-Stacking: A:Y.198 NAP.2: 22 residues within 4Å: Chain B: G.11, A.12, T.13, R.14, G.15, G.35, S.36, S.40, I.65, D.66, F.67, K.68, A.121, G.122, T.124, Q.125, E.126, V.143, S.183, G.194, T.195, Y.198 29 PLIP interactions: 29 interactions with chain B Hydrophobic interactions: B:T.195 Hydrogen bonds: B:G.11, B:T.13, B:T.13, B:R.14, B:S.36, B:S.36, B:S.40, B:D.66, B:D.66, B:F.67, B:K.68, B:G.122, B:Q.125, B:E.126, B:S.183, B:G.194, B:Y.198, B:Y.198 Water bridges: B:R.14, B:I.16, B:I.16, B:I.65, B:K.68, B:T.124 Salt bridges: B:R.14, B:R.14, B:R.14 pi-Stacking: B:Y.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yujie, Z. et al., Crystal structure of Saccharomyces cerevisiae 3-oxoacyl-[acyl-carrier-protein] reductase complexed with NADPH. To be Published

Release Date

2013-08-07

Peptides

3-oxoacyl-[acyl-carrier-protein] reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

3-oxoacyl-[acyl-carrier-protein] reductase