SMTL ID : 4fed.1

Crystal Structure of Htt36Q3H

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.81 Å

Oligo State

homo-trimer

Ligands

35 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)

ZN.1: 2 residues within 4Å: Chain A: D.65, M.330 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.65 ZN.2: 2 residues within 4Å: Chain A: H.203 Ligands: CA.9 No protein-ligand interaction detected (PLIP) ZN.3: 2 residues within 4Å: Chain A: E.310 Ligands: ZN.4 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.310, H2O.1 ZN.4: 3 residues within 4Å: Chain A: E.310, K.313 Ligands: ZN.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.310 ZN.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) ZN.6: 1 residues within 4Å: Chain A: K.1 No protein-ligand interaction detected (PLIP) ZN.7: 1 residues within 4Å: Chain A: H.39 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.39, A:H.39 ZN.8: 1 residues within 4Å: Chain A: E.172 No protein-ligand interaction detected (PLIP) ZN.10: 2 residues within 4Å: Chain B: E.291, E.310 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.291 ZN.11: 1 residues within 4Å: Chain B: S.211 No protein-ligand interaction detected (PLIP) ZN.12: 1 residues within 4Å: Chain B: D.65 No protein-ligand interaction detected (PLIP) ZN.13: 1 residues within 4Å: Chain B: E.38 No protein-ligand interaction detected (PLIP) ZN.14: 1 residues within 4Å: Chain B: D.82 No protein-ligand interaction detected (PLIP) ZN.15: 2 residues within 4Å: Chain B: K.256, E.328 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.328, H2O.1 ZN.16: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) ZN.17: 3 residues within 4Å: Chain B: W.158, Y.167, E.328 No protein-ligand interaction detected (PLIP) ZN.18: 2 residues within 4Å: Chain B: H.395, Q.396 No protein-ligand interaction detected (PLIP) ZN.19: 2 residues within 4Å: Chain B: E.172 Ligands: ZN.21 No protein-ligand interaction detected (PLIP) ZN.20: 1 residues within 4Å: Chain B: H.203 No protein-ligand interaction detected (PLIP) ZN.21: 2 residues within 4Å: Chain B: E.172 Ligands: ZN.19 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.172, B:E.172, H2O.1 ZN.22: 4 residues within 4Å: Chain B: K.170, E.172, D.180 Ligands: ZN.23 No protein-ligand interaction detected (PLIP) ZN.23: 3 residues within 4Å: Chain B: K.170, D.180 Ligands: ZN.22 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.180 ZN.24: 4 residues within 4Å: Chain C: K.26, D.30 Ligands: ZN.33, ZN.34 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:D.30 ZN.25: 1 residues within 4Å: Chain C: H.203 No protein-ligand interaction detected (PLIP) ZN.26: 1 residues within 4Å: Chain C: Q.398 No protein-ligand interaction detected (PLIP) ZN.27: 1 residues within 4Å: Chain C: S.211 No protein-ligand interaction detected (PLIP) ZN.28: 1 residues within 4Å: Chain C: H.39 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:H.39, C:H.39 ZN.29: 2 residues within 4Å: Chain C: K.256, E.328 No protein-ligand interaction detected (PLIP) ZN.30: 1 residues within 4Å: Chain C: E.291 3 PLIP interactions: 2 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.291, C:E.291, H2O.2 ZN.31: 4 residues within 4Å: Chain C: K.26, E.288 Ligands: ZN.33, ZN.34 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.288 ZN.32: 1 residues within 4Å: Chain C: E.38 No protein-ligand interaction detected (PLIP) ZN.33: 3 residues within 4Å: Chain C: K.26 Ligands: ZN.24, ZN.31 No protein-ligand interaction detected (PLIP) ZN.34: 3 residues within 4Å: Chain C: K.26 Ligands: ZN.24, ZN.31 No protein-ligand interaction detected (PLIP) ZN.35: 4 residues within 4Å: Chain B: Q.402 Chain C: D.209, S.211, I.212 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:D.209, C:D.209 ZN.36: 3 residues within 4Å: Chain C: H.395, H.397, Q.401 No protein-ligand interaction detected (PLIP)

1 x CA: CALCIUM ION(Non-covalent)

CA.9: 5 residues within 4Å: Chain A: P.133, A.134, K.137, H.203 Ligands: ZN.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, M., Beta conformation of polyglutamine track revealed by a crystal structure of Huntingtin N-terminal region with insertion of three histidine residues. Prion (2013)

Release Date

2013-03-13

Peptides

Maltose-binding periplasmic protein,Huntingtin: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Maltose-binding periplasmic protein,Huntingtin

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