SMTL ID : 4fex.2 (4 other biounits)

Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, with substrate kanamycin and small molecule inhibitor tyrphostin AG1478

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.71 Å

Oligo State

monomer

Ligands

1 x KAN: KANAMYCIN A(Non-covalent)

KAN.1: 10 residues within 4Å: Chain A: D.166, F.167, D.168, D.199, N.235, C.236, E.239, D.269, E.270, F.272 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:D.166, A:D.166, A:D.166, A:D.199, A:N.235, A:N.235, A:E.239, A:D.269, A:F.272 Water bridges: A:D.199, A:D.203, A:R.220, A:R.220, A:R.220

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: T.77, M.80, P.81, L.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:M.80, A:L.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stogios, P.J. et al., Structure-guided optimization of protein kinase inhibitors reverses aminoglycoside antibiotic resistance. Biochem.J. (2013)

Release Date

2012-06-20

Peptides

Aminoglycoside 3'-phosphotransferase AphA1-IAB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Aminoglycoside 3'-phosphotransferase AphA1-IAB

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