- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 9 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.4: 4 residues within 4Å:- Chain A: K.211, K.236, Q.237, H.243
6 PLIP interactions:1 interactions with chain B, 5 interactions with chain A- Hydrogen bonds: B:E.91, A:Q.237
- Water bridges: A:K.211, A:H.243
- Salt bridges: A:K.211, A:H.243
PO4.5: 5 residues within 4Å:- Chain A: R.182, D.207, R.393, R.457, Y.488
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:D.207, A:Y.488
- Water bridges: A:R.182, A:R.182, A:R.182, A:D.207, A:D.207, A:R.393
- Salt bridges: A:R.182, A:R.393, A:R.457
PO4.6: 5 residues within 4Å:- Chain A: R.8, E.70, H.71, F.72, S.73
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:F.72, A:S.73
- Water bridges: A:R.8, A:R.8, A:Q.10, A:R.67, A:S.73
- Salt bridges: A:R.8, A:H.71
PO4.7: 3 residues within 4Å:- Chain A: H.366, L.367, H.368
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:L.367
- Water bridges: A:L.367, A:H.368
- Salt bridges: A:H.366, A:H.368
PO4.8: 3 residues within 4Å:- Chain A: R.372, R.396, R.419
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.372
- Salt bridges: A:R.419
PO4.15: 4 residues within 4Å:- Chain B: K.211, K.236, Q.237, H.243
6 PLIP interactions:4 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:Q.237
- Water bridges: B:K.211, A:E.91, A:E.91
- Salt bridges: B:K.211, B:H.243
PO4.16: 4 residues within 4Å:- Chain B: R.8, H.71, F.72, S.73
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:E.70, B:F.72, B:S.73
- Water bridges: B:R.8, B:R.8, B:R.8, B:R.67, B:H.71
- Salt bridges: B:R.8, B:H.71
PO4.17: 4 residues within 4Å:- Chain B: R.182, R.393, R.457, Y.488
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:Y.488
- Water bridges: B:R.182, B:R.182, B:R.393
- Salt bridges: B:R.182, B:R.393, B:R.457
PO4.18: 2 residues within 4Å:- Chain B: H.366, H.368
4 PLIP interactions:4 interactions with chain B- Water bridges: B:L.367, B:L.367
- Salt bridges: B:H.366, B:H.368
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of a glycoside hydrolase family 33, candidate sialidase (BDI_2946) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution. To be published
- Release Date
- 2012-07-25
- Peptides
- glycoside hydrolase family 33, candidate sialidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 9 x PO4: PHOSPHATE ION(Non-functional Binders)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of a glycoside hydrolase family 33, candidate sialidase (BDI_2946) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution. To be published
- Release Date
- 2012-07-25
- Peptides
- glycoside hydrolase family 33, candidate sialidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D