SMTL ID : 4fl3.1

Structural and Biophysical Characterization of the Syk Activation Switch

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 21 residues within 4Å: Chain A: L.377, S.379, G.380, N.381, F.382, G.383, V.385, A.400, K.402, V.433, M.448, E.449, M.450, A.451, P.455, K.458, R.498, N.499, L.501, D.512 Ligands: MG.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:N.381, A:N.381, A:E.449, A:A.451, A:R.498 Water bridges: A:K.402, A:K.402, A:K.458, A:N.499, A:N.499, A:N.499, A:N.499, A:D.512, A:D.512 Salt bridges: A:K.402

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.499, D.512 Ligands: ANP.1 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.512, H2O.8, H2O.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gradler, U. et al., Structural and biophysical characterization of the syk activation switch. J.Mol.Biol. (2013)

Release Date

2012-11-28

Peptides

Tyrosine-protein kinase SYK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase SYK