SMTL ID : 4flp.2 (1 other biounit)

Crystal Structure of the first bromodomain of human BRDT in complex with the inhibitor JQ1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x JQ1: (6S)-6-(2-tert-butoxy-2-oxoethyl)-4-(4-chlorophenyl)-2,3,9-trimethyl-6,7-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium(Non-covalent)

JQ1.1: 10 residues within 4Å: Chain A: W.32, P.33, F.34, V.38, L.43, L.45, N.91, D.96, I.97, M.100 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:W.32, A:W.32, A:W.32, A:P.33, A:F.34, A:V.38, A:L.43, A:L.45, A:D.96, A:I.97, A:I.97 Hydrogen bonds: A:N.91, A:N.91

1 x K: POTASSIUM ION(Non-covalent)

K.2: 3 residues within 4Å: Chain A: Y.88, L.89, N.91 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:Y.88, A:L.89, A:N.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matzuk, M.M. et al., Small-Molecule Inhibition of BRDT for Male Contraception. Cell(Cambridge,Mass.) (2012)

Release Date

2012-07-11

Peptides

Bromodomain testis-specific protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Bromodomain testis-specific protein

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