SMTL ID : 4fmc.3 (2 other biounits)

EspG-Rab1 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x AF3: ALUMINUM FLUORIDE(Non-covalent)

AF3.1: 8 residues within 4Å: Chain A: R.162, Q.247 Chain B: S.7, G.8, K.11, T.30 Ligands: GDP.2, MG.3 No protein-ligand interaction detected (PLIP)

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 10 residues within 4Å: Chain A: R.162 Chain B: D.6, G.8, V.9, G.10, K.11, S.12, C.13 Ligands: AF3.1, MG.3 9 PLIP interactions: 7 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.8, B:V.9, B:G.10, B:K.11, B:S.12, B:C.13 Salt bridges: B:K.11, A:R.162, A:R.162

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 7 residues within 4Å: Chain B: K.11, S.12, T.30, D.53, T.54 Ligands: AF3.1, GDP.2 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:S.12, B:T.30, B:D.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, N. et al., Structurally Distinct Bacterial TBC-like GAPs Link Arf GTPase to Rab1 Inactivation to Counteract Host Defenses. Cell(Cambridge,Mass.) (2012)

Release Date

2012-09-05

Peptides

ROrf2: A
Ras-related protein Rab-1A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

ROrf2

Ras-related protein Rab-1A

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