SMTL ID : 4fnb.1

Crystal structure of the Mtb enoyl CoA isomerase (Rv0632c) in complex with hydroxybutyrl CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-trimer

Ligands

9 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: L.199, N.200, Q.201, H.202 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.201, A:H.202 Water bridges: A:N.200, A:N.200 Salt bridges: A:H.202 SO4.3: 11 residues within 4Å: Chain A: L.150, T.151, R.152 Chain B: L.150, T.151, R.152 Chain C: L.150, T.151, R.152 Ligands: SO4.7, SO4.11 10 PLIP interactions: 3 interactions with chain C, 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: C:R.152, B:L.150, B:R.152, A:R.152 Water bridges: C:S.153, B:S.153, A:S.153 Salt bridges: C:R.152, B:R.152, A:R.152 SO4.4: 1 residues within 4Å: Chain A: R.10 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.10 SO4.5: 4 residues within 4Å: Chain B: L.199, N.200, Q.201, H.202 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.201, B:H.202 Water bridges: B:N.200, B:N.200 Salt bridges: B:H.202 SO4.7: 11 residues within 4Å: Chain A: L.150, T.151, R.152 Chain B: L.150, T.151, R.152 Chain C: L.150, T.151, R.152 Ligands: SO4.3, SO4.11 10 PLIP interactions: 4 interactions with chain C, 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: C:L.150, C:R.152, B:R.152, A:R.152 Water bridges: C:S.153, B:S.153, A:S.153 Salt bridges: C:R.152, B:R.152, A:R.152 SO4.8: 1 residues within 4Å: Chain B: R.10 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.10 SO4.9: 4 residues within 4Å: Chain C: L.199, N.200, Q.201, H.202 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:Q.201, C:H.202 Water bridges: C:N.200, C:N.200 Salt bridges: C:H.202 SO4.11: 11 residues within 4Å: Chain A: L.150, T.151, R.152 Chain B: L.150, T.151, R.152 Chain C: L.150, T.151, R.152 Ligands: SO4.3, SO4.7 10 PLIP interactions: 3 interactions with chain C, 3 interactions with chain B, 4 interactions with chain A Hydrogen bonds: C:R.152, B:R.152, A:L.150, A:R.152 Water bridges: C:S.153, B:S.153, A:S.153 Salt bridges: C:R.152, B:R.152, A:R.152 SO4.12: 1 residues within 4Å: Chain C: R.10 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:R.10

3 x 3HC: 3-HYDROXYBUTANOYL-COENZYME A(Non-covalent)

3HC.2: 18 residues within 4Å: Chain A: K.23, V.24, A.26, R.57, G.61, F.63, D.64, L.65, K.66, L.68, I.106, A.107, M.108, N.130, E.131, I.134, M.136, P.139 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.139 Hydrogen bonds: A:F.63, A:D.64, A:L.65, A:M.108, A:N.130 Water bridges: A:G.61 Salt bridges: A:K.23, A:R.57, A:R.57 3HC.6: 18 residues within 4Å: Chain B: K.23, V.24, A.26, R.57, G.61, F.63, D.64, L.65, K.66, L.68, I.106, A.107, M.108, N.130, E.131, I.134, M.136, P.139 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:P.139 Hydrogen bonds: B:F.63, B:D.64, B:L.65, B:M.108, B:N.130 Water bridges: B:G.61 Salt bridges: B:K.23, B:R.57, B:R.57 3HC.10: 18 residues within 4Å: Chain C: K.23, V.24, A.26, R.57, G.61, F.63, D.64, L.65, K.66, L.68, I.106, A.107, M.108, N.130, E.131, I.134, M.136, P.139 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:P.139 Hydrogen bonds: C:F.63, C:D.64, C:L.65, C:M.108, C:N.130 Water bridges: C:G.61 Salt bridges: C:K.23, C:R.57, C:R.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bruning, J.B. et al., Crystal Structure and Mechanism of the Prokaryotic Enoyl CoA Isomerase. To be Published

Release Date

2013-05-29

Peptides

Enoyl-CoA hydratase/isomerase family protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Enoyl-CoA hydratase/isomerase family protein

Related Entries With Identical Sequence