SMTL ID : 4fqh.1 (1 other biounit)

Crystal Structure of Fab CR9114

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

hetero-1-1-mer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: G.198, T.199 No protein-ligand interaction detected (PLIP) EDO.3: 6 residues within 4Å: Chain A: G.100, G.107, D.109 Chain B: L.47, Y.50 Ligands: NO3.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.100, A:G.107, A:G.107 EDO.4: 3 residues within 4Å: Chain A: Q.43, G.44 Chain B: G.103 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.44 Water bridges: A:G.42, A:Q.43 EDO.5: 3 residues within 4Å: Chain A: Y.103, Y.105 Chain B: R.32 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.32, B:R.32 EDO.6: 6 residues within 4Å: Chain B: A.9, Q.106, T.108, P.145, G.146, A.147 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.108, B:G.146, B:Y.176 EDO.7: 6 residues within 4Å: Chain B: A.3, S.25, S.27, N.28, D.93, L.96 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.25, B:S.27, B:N.28, B:D.93

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.2: 6 residues within 4Å: Chain A: N.101, Y.105, S.106, G.107 Chain B: Y.50 Ligands: EDO.3 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:G.107 Water bridges: B:N.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dreyfus, C. et al., Highly conserved protective epitopes on influenza B viruses. Science (2012)

Release Date

2012-08-22

Peptides

antibody CR9114 heavy chain: A
antibody CR9114 light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

antibody CR9114 heavy chain

antibody CR9114 light chain

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