SMTL ID : 4ft6.1

Crystal Structure of Pseudomonas aeruginosa OccK9 (OpdG)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

4 x C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(Non-functional Binders)

C8E.1: 4 residues within 4Å: Chain A: H.264, Y.310, Y.312, F.314 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.310, A:Y.312, A:Y.312, A:F.314 C8E.2: 6 residues within 4Å: Chain A: N.21, Y.23, W.41, D.73, L.365, L.385 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.23, A:W.41, A:W.41 C8E.3: 5 residues within 4Å: Chain A: L.64, L.99, G.100, V.101, E.116 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.101, A:V.101, A:E.116 C8E.4: 4 residues within 4Å: Chain A: R.347, V.349, W.367, M.371 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:W.367

1 x DMU: DECYL-BETA-D-MALTOPYRANOSIDE(Non-covalent)

DMU.5: 9 residues within 4Å: Chain A: L.47, G.66, Q.67, A.97, R.98, L.99, S.165, D.166, H.167 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.47, A:A.97 Hydrogen bonds: A:L.99, A:L.99, A:D.166, A:H.167, A:H.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eren, E. et al., Crystal Structures of OccK Subfamily Proteins. To be Published

Release Date

2013-07-24

Peptides

Probable porin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Probable porin